ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: mir-155
source: miRBase, original name: gga-mir-155 (MI0001176)
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAATGCTAATCGTGATAGGGG miRNA* CCTACATGTTAGCATTAACA mismatches: 0 bulges: 2 |
pre-miRNA
TGTTAATGCTAATCGTGATAGGGGTTTTTACCTCTGAATGACTCCTACATGTTAGCATTAACA
dot-bracket secondary structure
.(((((((((((.((((.((((((((((((....)))).))))))))))))))))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] International Chicken Genome Sequencing Consortium, Nature. 432:695-716(2004)., "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
TGTTAATGCTAATCGTGATAGGGGTTTTTACCTCTGAATGACTCCTACATGTTAGCATTAACA
dot-bracket secondary structure
.(((((((((((.((((.((((((((((((....)))).))))))))))))))))))))))).
SIMILARITIES| miRBase eca-mir-155: 2e-25 PMRD no hits microPC no hits | UniProt no hits RFAM mir-155: 6e-29 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] International Chicken Genome Sequencing Consortium, Nature. 432:695-716(2004)., "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
