ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: mir-193
source: miRBase, original name: gga-mir-193b (MI0003698)
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACTGGCCCACAAAGTCCCGCTTT miRNA* GTCGGGGTTTTGGGGGCGAGATGA mismatches: 6 bulges: 0 |
pre-miRNA
GTGGTTCCAGAGTCGGGGTTTTGGGGGCGAGATGAGCTTATGTTTTATCCAACTGGCCCACAAAGTCCCGCTTTTGGTGGTCA
dot-bracket secondary structure
.((..(((((((.((((..((((.((((.((.(((((....))).....)).)).)))).))))..)))).)))))).)..))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GTGGTTCCAGAGTCGGGGTTTTGGGGGCGAGATGAGCTTATGTTTTATCCAACTGGCCCACAAAGTCCCGCTTTTGGTGGTCA
dot-bracket secondary structure
.((..(((((((.((((..((((.((((.((.(((((....))).....)).)).)))).))))..)))).)))))).)..))
SIMILARITIES| miRBase tgu-mir-193a: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-193: 1e-40 |
Identical with: tgu-mir-193a from miRBase (MNEST026490) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
