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ABOUT THIS RECORD
ID:
MNEST026350
species:
Gallus gallus
source:
miRBase, original name:
gga-mir-2129
(
MI0010734
)
Taxonomy by NCBI:
Gallus gallus
Gallus
Phasianinae
Phasianidae
Galliformes
Neognathae
Aves
Coelurosauria
Theropoda
Saurischia
Dinosauria
Archosauria
Sauria
Sauropsida
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGCAGGACTGGCTTTGTTACGA
miRNA*
GGGACAAGGACCAGGATACTGCAGTGCT
mismatches:
5
bulges:
5
View larger
pre-miRNA
GGGAAGGCTGCAGT
GGGACAAGGACCAGGATACTGCAGTGCT
GTGACAG
CAGCAGGACTGGCTTTGTTACGA
GGAGCCTCACCC
dot-bracket secondary structure
((..(((((.(..(
(..((((((.((((....((((..((((
(...)))
))))))..))))))))))..)).
.))))))..)).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Northern, Solexa
references
[
1
] Rathjen T, Pais H, Sweetman D, Moulton V, Munsterberg A, Dalmay T,
FEBS Lett. 583:1422-1426(2009).
,
"High throughput sequencing of microRNAs in chicken somites"