ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: let-7
source: miRBase, original name: cfa-let-7a-2 (MI0010328)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGGTTGTATAGTT miRNA* CTGTACAGCCTCCTAGCTTTCC mismatches: 3 bulges: 0 |
pre-miRNA
CTGCATGTTCCCAGGTTGAGGTAGTAGGTTGTATAGTTTAGAATTACATCAAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGTCTTGCAC
dot-bracket secondary structure
.((((....((((((..(((.(((.(((((((((((((.....(..(.....)..)...))))))))))))).))).)))..))))))...)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CTGCATGTTCCCAGGTTGAGGTAGTAGGTTGTATAGTTTAGAATTACATCAAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGTCTTGCAC
dot-bracket secondary structure
.((((....((((((..(((.(((.(((((((((((((.....(..(.....)..)...))))))))))))).))).)))..))))))...)))).
SIMILARITIES| miRBase mmu-let-7a-2: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 2e-36 |
Identical with: ppy-let-7a-2 from miRBase (MNEST030732) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
