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ABOUT THIS RECORD
ID:
MNEST026608
species:
Canis familiaris
miRNA family:
let-7
source:
miRBase, original name:
cfa-let-7c
(
MI0008076
)
SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATGGTT
miRNA*
CTGTACAACCTTCTAGCTTTCC
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGAGGTAGTAGGTTGTATGGTT
TAGAGTTACACCCTGGGAGTTAA
CTGTACAACCTTCTAGCTTTCC
dot-bracket secondary structure
.(((.(((.(((((((((((((
..((.(..(.....)..).))))
))))))))))).))).)))...
SIMILARITIES
miRBase
gga-let-7c
:
2e-32
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
let-7: 7e-29
Identical with:
ptr-let-7c
from miRBase (
MNEST030130
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"