ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: let-7
source: miRBase, original name: cfa-let-7g (MI0008036)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGTTTGTACAGTT miRNA* CTGTACAGGCCACTGCCTTGCC mismatches: 2 bulges: 0 |
pre-miRNA
TGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCC
dot-bracket secondary structure
.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
TGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCC
dot-bracket secondary structure
.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))...
SIMILARITIES| miRBase gga-let-7g: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 2e-38 |
Identical with: mmu-let-7g from miRBase (MNEST031761) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
