ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-10
source: miRBase, original name: cfa-mir-10b (MI0010331)
SEQUENCE & STRUCTURE| miRNA CCCTGTAGAACCGAATTTGTGT miRNA* ACAGATTCGATTCTAGGGGAA mismatches: 2 bulges: 1 |
pre-miRNA
GTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCACATAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTC
A
dot-bracket secondary structure
....(((((.((((((((.((((.(((((.((((((((((..((......))...)))))))))).))))))))).)))))))).)))))..........
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCACATAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTC
A
dot-bracket secondary structure
....(((((.((((((((.((((.(((((.((((((((((..((......))...)))))))))).))))))))).)))))))).)))))..........
.
SIMILARITIES| miRBase mml-mir-10b: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 2e-33 |
Identical with: ssc-mir-10b from miRBase (MNEST033910) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
