ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-15
source: miRBase, original name: cfa-mir-16-2 (MI0008084)
SEQUENCE & STRUCTURE| miRNA TAGCAGCACGTAAATATTGGCG miRNA* CCAATATTATTGTGCTGCTTTA mismatches: 4 bulges: 0 |
pre-miRNA
TAGCAGCACGTAAATATTGGCGTAGTGAAATAAAAATTAAACACCAATATTATTGTGCTGCTTTA
dot-bracket secondary structure
.(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
TAGCAGCACGTAAATATTGGCGTAGTGAAATAAAAATTAAACACCAATATTATTGTGCTGCTTTA
dot-bracket secondary structure
.(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))...
SIMILARITIES| miRBase eca-mir-16: 6e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-16: 3e-25 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
