ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-17
source: miRBase, original name: cfa-mir-18a (MI0010324)
SEQUENCE & STRUCTURE| miRNA TAAGGTGCATCTAGTGCAGATA miRNA* CTGCCCTAAGTGCTCCTTCTGGC mismatches: 4 bulges: 3 |
pre-miRNA
GTGCTTTTTGTTCTAAGGTGCATCTAGTGCAGATAGTGAAGTAGATTAGCATCTACTGCCCTAAGTGCTCCTTCTGGCATAAGAAGTTATGT
dot-bracket secondary structure
..(((((((((.((((((.(((..(((.((((.(((((..(.....)..)).))))))).)))..))).)))..))).))))))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GTGCTTTTTGTTCTAAGGTGCATCTAGTGCAGATAGTGAAGTAGATTAGCATCTACTGCCCTAAGTGCTCCTTCTGGCATAAGAAGTTATGT
dot-bracket secondary structure
..(((((((((.((((((.(((..(((.((((.(((((..(.....)..)).))))))).)))..))).)))..))).))))))))).....
SIMILARITIES| miRBase ssc-mir-18a: 3e-47 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ssc-mir-18a from miRBase (MNEST033917) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
