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ABOUT THIS RECORD

ID: MNEST026632
species: Canis familiaris
miRNA family: mir-19
source: miRBase, original name: cfa-mir-19b-2 (MI0008174)







SEQUENCE & STRUCTURE
miRNA
TGTGCAAATCCATGCAAAACTG

miRNA*
GTTTTGCAGGTTTGCATTTCAGC

mismatches: 2
bulges: 5

View larger
pre-miRNA
GTTTTGCAGGTTTGCATTTCAGCGTACTTGTGCATATAGGGCTGTGCAAATCCATGCAAAACTG

dot-bracket secondary structure
((((((((((((((((...((((...(((((....))))))))))))))).)).))))))))..


SIMILARITIES
miRBase eca-mir-19b-2: 8e-19

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-19: 2e-29

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"




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