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ABOUT THIS RECORD
ID:
MNEST026632
species:
Canis familiaris
miRNA family:
mir-19
source:
miRBase, original name:
cfa-mir-19b-2
(
MI0008174
)
SEQUENCE & STRUCTURE
miRNA
TGTGCAAATCCATGCAAAACTG
miRNA*
GTTTTGCAGGTTTGCATTTCAGC
mismatches:
2
bulges:
5
View larger
pre-miRNA
GTTTTGCAGGTTTGCATTTCAGC
GTACTTGTGCATATAGGGC
TGTGCAAATCCATGCAAAACTG
dot-bracket secondary structure
((((((((((((((((...((((
...(((((....)))))))
)))))))).)).))))))))..
SIMILARITIES
miRBase
eca-mir-19b-2
:
8e-19
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-19: 2e-29
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"