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ABOUT THIS RECORD

ID: MNEST026637
species: Canis familiaris
miRNA family: mir-23
source: miRBase, original name: cfa-mir-23a (MI0008039)







SEQUENCE & STRUCTURE
miRNA
ATCACATTGCCAGGGATTT

miRNA*
GTTCCTGGGGATGGGATTT

mismatches: 4
bulges: 0

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pre-miRNA
GTTCCTGGGGATGGGATTTGCTGCCTGTCACAAATCACATTGCCAGGGATTT

dot-bracket secondary structure
((((((((.((((.((((((.((.....)))))))).)))).))))))))..


SIMILARITIES
miRBase bta-mir-23a: 1e-23

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-23: 2e-22

Identical with: bta-mir-23a from miRBase (MNEST033144)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"




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