ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-23
source: miRBase, original name: cfa-mir-23a (MI0008039)
SEQUENCE & STRUCTURE| miRNA ATCACATTGCCAGGGATTT miRNA* GTTCCTGGGGATGGGATTT mismatches: 4 bulges: 0 |
pre-miRNA
GTTCCTGGGGATGGGATTTGCTGCCTGTCACAAATCACATTGCCAGGGATTT
dot-bracket secondary structure
((((((((.((((.((((((.((.....)))))))).)))).))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
GTTCCTGGGGATGGGATTTGCTGCCTGTCACAAATCACATTGCCAGGGATTT
dot-bracket secondary structure
((((((((.((((.((((((.((.....)))))))).)))).))))))))..
SIMILARITIES| miRBase bta-mir-23a: 1e-23 PMRD no hits microPC no hits | UniProt no hits RFAM mir-23: 2e-22 |
Identical with: bta-mir-23a from miRBase (MNEST033144) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
