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ABOUT THIS RECORD
ID:
MNEST026645
species:
Canis familiaris
miRNA family:
mir-27
source:
miRBase, original name:
cfa-mir-27a
(
MI0008040
)
SEQUENCE & STRUCTURE
miRNA
TTCACAGTGGCTAAGTTCCG
miRNA*
GGGCTTAGCTGCTTGTGAGCA
mismatches:
4
bulges:
1
View larger
pre-miRNA
GGGCTTAGCTGCTTGTGAGCA
GAGTCCACACCAAGTCGTG
TTCACAGTGGCTAAGTTCCG
dot-bracket secondary structure
(((((((((..((.(((((((
((.(........).)).))
)))))))..)))))))))..
SIMILARITIES
miRBase
mml-mir-27a
:
5e-26
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-27: 9e-25
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"