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ABOUT THIS RECORD
ID:
MNEST026653
species:
Canis familiaris
miRNA family:
mir-30
source:
miRBase, original name:
cfa-mir-30a
(
MI0008000
)
SEQUENCE & STRUCTURE
miRNA
TGTAAACATCCTCGACTGGAAGC
miRNA*
TTTCAGTCGGATGTTTGCAGC
mismatches:
0
bulges:
2
View larger
pre-miRNA
TGTAAACATCCTCGACTGGAAGC
TGTGAAGCCACAGATGGGC
TTTCAGTCGGATGTTTGCAGC
dot-bracket secondary structure
(((((((((((..((((((((((
((((....))).....)))
)))))))))))))))))))..
SIMILARITIES
miRBase
ggo-mir-30a
:
4e-30
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-30: 1e-27
Identical with:
ppy-mir-30a
from miRBase (
MNEST030781
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"