miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST026654
species:
Canis familiaris
miRNA family:
mir-30
source:
miRBase, original name:
cfa-mir-30b
(
MI0008013
)
SEQUENCE & STRUCTURE
miRNA
TGTAAACATCCTACACTCAGCT
miRNA*
CTGGGAGGTGGATGTTTACTTC
mismatches:
2
bulges:
2
View larger
pre-miRNA
TGTAAACATCCTACACTCAGCT
GTAGTACATGGATTGG
CTGGGAGGTGGATGTTTACTTC
dot-bracket secondary structure
.((((((((((.((.(((((((
(............)))
)))))..))))))))))))...
SIMILARITIES
miRBase
mml-mir-30b
:
5e-26
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-30: 2e-16
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"