ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-31
source: miRBase, original name: cfa-mir-31 (MI0007994)
SEQUENCE & STRUCTURE| miRNA AGGCAAGATGCTGGCATAGCTGT miRNA* CTGCTATGCCAACATATTGCCATC mismatches: 4 bulges: 1 |
pre-miRNA
AGGCAAGATGCTGGCATAGCTGTTGAACTGAGAACCTGCTATGCCAACATATTGCCATC
dot-bracket secondary structure
.(((((.(((.(((((((((.(((........)))..))))))))).))).)))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
AGGCAAGATGCTGGCATAGCTGTTGAACTGAGAACCTGCTATGCCAACATATTGCCATC
dot-bracket secondary structure
.(((((.(((.(((((((((.(((........)))..))))))))).))).)))))...
SIMILARITIES| miRBase eca-mir-31: 8e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-31: 4e-24 |
Identical with: rno-mir-3554 from miRBase (MNEST033042) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
