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ABOUT THIS RECORD
ID:
MNEST026659
species:
Canis familiaris
miRNA family:
mir-31
source:
miRBase, original name:
cfa-mir-31
(
MI0007994
)
SEQUENCE & STRUCTURE
miRNA
AGGCAAGATGCTGGCATAGCTGT
miRNA*
CTGCTATGCCAACATATTGCCATC
mismatches:
4
bulges:
1
View larger
pre-miRNA
AGGCAAGATGCTGGCATAGCTGT
TGAACTGAGAAC
CTGCTATGCCAACATATTGCCATC
dot-bracket secondary structure
.(((((.(((.(((((((((.((
(........)))
..))))))))).))).)))))...
SIMILARITIES
miRBase
eca-mir-31
:
8e-28
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-31: 4e-24
Identical with:
rno-mir-3554
from miRBase (
MNEST033042
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"