ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-101
source: miRBase, original name: cfa-mir-101-1 (MI0008107)
SEQUENCE & STRUCTURE| miRNA TACAGTACTGTGATAACTGA miRNA* AGTTATCACAGTGCTGATGCT mismatches: 2 bulges: 1 |
pre-miRNA
AGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGA
dot-bracket secondary structure
((((((((((((((((.((((............))))))))))))))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
AGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGA
dot-bracket secondary structure
((((((((((((((((.((((............))))))))))))))))))))..
SIMILARITIES| miRBase lla-mir-101: 2e-25 PMRD no hits microPC no hits | UniProt no hits RFAM mir-101: 5e-17 |
Identical with: sla-mir-101 from miRBase (MNEST027611) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
