ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-105
source: miRBase, original name: cfa-mir-105a (MI0010377)
SEQUENCE & STRUCTURE| miRNA TCAAATGCTCAGACTCCTGT miRNA* GGATGTTTGAGCATGTGCTA mismatches: 4 bulges: 0 |
pre-miRNA
TGTGCATCGTAGTCAAATGCTCAGACTCCTGTGGTGGCTGCTCATGCACCACGGATGTTTGAGCATGTGCTACGGTGTCTA
dot-bracket secondary structure
...(((((((((.((.((((((((((..((((((((.(.......)))))))))..)))))))))).)))))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TGTGCATCGTAGTCAAATGCTCAGACTCCTGTGGTGGCTGCTCATGCACCACGGATGTTTGAGCATGTGCTACGGTGTCTA
dot-bracket secondary structure
...(((((((((.((.((((((((((..((((((((.(.......)))))))))..)))))))))).)))))))))))...
SIMILARITIES| miRBase bta-mir-105a: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-105: 6e-30 |
Identical with: bta-mir-105a from miRBase (MNEST033192) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
