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ABOUT THIS RECORD
ID:
MNEST026691
species:
Canis familiaris
miRNA family:
mir-125
source:
miRBase, original name:
cfa-mir-125b-2
(
MI0008077
)
SEQUENCE & STRUCTURE
miRNA
TCCCTGAGACCCTAACTTGTGA
miRNA*
ACAAGTCAGGCTCTTGGGACCT
mismatches:
6
bulges:
0
View larger
pre-miRNA
TCCCTGAGACCCTAACTTGTGA
GGTATTTTAGTAACATC
ACAAGTCAGGCTCTTGGGACCT
dot-bracket secondary structure
..((..(((.(((.((((((((
..(((....)))...))
)))))).))).)))..))....
SIMILARITIES
miRBase
age-mir-125b-2
:
5e-29
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
lin-4: 6e-23
Identical with:
lla-mir-125b-2
from miRBase (
MNEST027571
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"