ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-126
source: miRBase, original name: cfa-mir-126 (MI0008154)
SEQUENCE & STRUCTURE| miRNA CATTATTACTTTTGGTACGCG miRNA* CGTACCGTGAGTAATAATGCG mismatches: 2 bulges: 0 |
pre-miRNA
CATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCG
dot-bracket secondary structure
(((((((((((.(((((((.(...(((....)))..).))))))).)))))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
CATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCG
dot-bracket secondary structure
(((((((((((.(((((((.(...(((....)))..).))))))).)))))))))))..
SIMILARITIES| miRBase gga-mir-126: 8e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-126: 6e-26 |
Identical with: bta-mir-126 from miRBase (MNEST033204) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
