ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-130
source: miRBase, original name: cfa-mir-130b (MI0008064)
SEQUENCE & STRUCTURE| miRNA CAGTGCAATGATGAAAGGGCAT miRNA* ACTCTTTCCCTGTTGCACTACT mismatches: 6 bulges: 0 |
pre-miRNA
ACTCTTTCCCTGTTGCACTACTGTGGGCCGCTGGGAAGCAGTGCAATGATGAAAGGGCAT
dot-bracket secondary structure
.(((((((..(((((((((.((.....((....)).)).)))))))))..)))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
ACTCTTTCCCTGTTGCACTACTGTGGGCCGCTGGGAAGCAGTGCAATGATGAAAGGGCAT
dot-bracket secondary structure
.(((((((..(((((((((.((.....((....)).)).)))))))))..)))))))...
SIMILARITIES| miRBase mml-mir-130b: 5e-26 PMRD no hits microPC no hits | UniProt no hits RFAM mir-130: 2e-22 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
