ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-133
source: miRBase, original name: cfa-mir-133a (MI0010326)
SEQUENCE & STRUCTURE| miRNA TTGGTCCCCTTCAACCAGCTGT miRNA* AGCTGGTAAAATGGAACCAAAT mismatches: 5 bulges: 0 |
pre-miRNA
CAATGCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGA
dot-bracket secondary structure
((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CAATGCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGA
dot-bracket secondary structure
((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))).
SIMILARITIES| miRBase age-mir-133a: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-133: 9e-26 |
Identical with: sla-mir-133a from miRBase (MNEST027618) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
