ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-133
source: miRBase, original name: cfa-mir-133b (MI0010327)
SEQUENCE & STRUCTURE| miRNA TTTGGTCCCCTTCAACCAGCTA miRNA* GCTGGTCAAACGGAACCAAGTC mismatches: 4 bulges: 0 |
pre-miRNA
CCCTGCTCTGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAGCAGGGCTGGCAA
dot-bracket secondary structure
(((((((.((((((((..((.((.((((((.((.((((...)))))))))))).)).))..)))))))).))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CCCTGCTCTGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAGCAGGGCTGGCAA
dot-bracket secondary structure
(((((((.((((((((..((.((.((((((.((.((((...)))))))))))).)).))..)))))))).))))))).......
SIMILARITIES| miRBase mml-mir-133b: 2e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-133: 3e-41 |
Identical with: ptr-mir-133b from miRBase (MNEST030222) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
