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ABOUT THIS RECORD
ID:
MNEST026706
species:
Canis familiaris
miRNA family:
mir-135
source:
miRBase, original name:
cfa-mir-135a-2
(
MI0008025
)
SEQUENCE & STRUCTURE
miRNA
TATGGCTTTTTATTCCTATGTGA
miRNA*
ATGTAGGGATGGAAGCCATGAA
mismatches:
0
bulges:
1
View larger
pre-miRNA
T
TATGGCTTTTTATTCCTATGTGA
TAGTAATAAAGTCTC
ATGTAGGGATGGAAGCCATGAA
A
dot-bracket secondary structure
(
((((((((((.((((((((((((
.(.(.....).).))
))))))))))))))))))))).
.
SIMILARITIES
miRBase
gga-mir-135a-2
:
1e-29
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-135: 3e-28
Identical with:
oan-mir-135a
from miRBase (
MNEST031491
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"