ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-145
source: miRBase, original name: cfa-mir-145 (MI0010359)
SEQUENCE & STRUCTURE| miRNA GTCCAGTTTTCCCAGGAATCCCT miRNA* GGATTCCTGGAAATACTGTTCTT mismatches: 4 bulges: 0 |
pre-miRNA
TGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTAGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGTT
dot-bracket secondary structure
((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).))))..))))))).)).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTAGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGTT
dot-bracket secondary structure
((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).))))..))))))).)).....
SIMILARITIES| miRBase ggo-mir-145: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-145: 6e-36 |
Identical with: ppy-mir-145 from miRBase (MNEST030849) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
