ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-181
source: miRBase, original name: cfa-mir-181b-2 (MI0008153)
SEQUENCE & STRUCTURE| miRNA AACATTCATTGCTGTCGGTG miRNA* CTGATCAATGAATGCAAA mismatches: 2 bulges: 2 |
pre-miRNA
AACATTCATTGCTGTCGGTGGGTTTGAGTCTGAATCAACTCACTGATCAATGAATGCAAA
dot-bracket secondary structure
..(((((((((..(((((((((((.((.......))))))))))))))))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
AACATTCATTGCTGTCGGTGGGTTTGAGTCTGAATCAACTCACTGATCAATGAATGCAAA
dot-bracket secondary structure
..(((((((((..(((((((((((.((.......))))))))))))))))))))))....
SIMILARITIES| miRBase eca-mir-181b: 2e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 0.00001 |
Identical with: ssc-mir-181b-2 from miRBase (MNEST034009) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
