ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-182
source: miRBase, original name: cfa-mir-182 (MI0010336)
SEQUENCE & STRUCTURE| miRNA TTTGGCAATGGTAGAACTCACACT miRNA* TGGTTCTAGACTTGCCAACTA mismatches: 2 bulges: 5 |
pre-miRNA
GCTTGCCTCCCGCCGTTTTTGGCAATGGTAGAACTCACACTGGTGAGGTAATGGGATCCGGTGGTTCTAGACTTGCCAACTATGGTGCGAGG
dot-bracket secondary structure
.....((((.((((((..(((((((.(.((((((...((((((..............))))))))))))..))))))))..)))))).))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GCTTGCCTCCCGCCGTTTTTGGCAATGGTAGAACTCACACTGGTGAGGTAATGGGATCCGGTGGTTCTAGACTTGCCAACTATGGTGCGAGG
dot-bracket secondary structure
.....((((.((((((..(((((((.(.((((((...((((((..............))))))))))))..))))))))..)))))).))))
SIMILARITIES| miRBase bta-mir-182: 1e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-182: 1e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
