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ABOUT THIS RECORD
ID:
MNEST026738
species:
Canis familiaris
miRNA family:
mir-183
source:
miRBase, original name:
cfa-mir-183
(
MI0008017
)
SEQUENCE & STRUCTURE
miRNA
TATGGCACTGGTAGAATTCACT
miRNA*
TGAATTACCGAAGGGCCATAAA
mismatches:
2
bulges:
4
View larger
pre-miRNA
TATGGCACTGGTAGAATTCACT
GTGAACAGTCTCGGTCAG
TGAATTACCGAAGGGCCATAAA
dot-bracket secondary structure
((((((..(((((..(((((((
((((......)))..)))
))))))))))....))))))..
SIMILARITIES
miRBase
eca-mir-183
:
1e-29
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-183: 6e-26
Identical with:
bta-mir-183
from miRBase (
MNEST033251
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"