ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-186
source: miRBase, original name: cfa-mir-186 (MI0008108)
SEQUENCE & STRUCTURE| miRNA CAAAGAATTCTCCTTTTGGGCT miRNA* CCCAAAGGTGAATTTTTTGGG mismatches: 1 bulges: 1 |
pre-miRNA
CAAAGAATTCTCCTTTTGGGCTTTCTGATTTTATTTTAAGCCCAAAGGTGAATTTTTTGGG
dot-bracket secondary structure
((((((((((.(((((.((((((...((......)).))))))))))).))))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
CAAAGAATTCTCCTTTTGGGCTTTCTGATTTTATTTTAAGCCCAAAGGTGAATTTTTTGGG
dot-bracket secondary structure
((((((((((.(((((.((((((...((......)).))))))))))).))))))))))..
SIMILARITIES| miRBase eca-mir-186: 5e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-186: 1e-27 |
Identical with: bta-mir-186 from miRBase (MNEST033254) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
