ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-188
source: miRBase, original name: cfa-mir-188 (MI0010379)
SEQUENCE & STRUCTURE| miRNA CATCCCTTGCATGGTGGAGGGT miRNA* CCTCCCACATGCAGGGTTTGCA mismatches: 5 bulges: 0 |
pre-miRNA
TGCTCCCTCTCTCACATCCCTTGCATGGTGGAGGGTGAGCTTTTTGAAAACCCCTCCCACATGCAGGGTTTGCAGGATGGTGAGCC
dot-bracket secondary structure
.((((((..(((..((..(((((((((..((((((....(.....).....))))))..)))))))))..))..))).)).)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TGCTCCCTCTCTCACATCCCTTGCATGGTGGAGGGTGAGCTTTTTGAAAACCCCTCCCACATGCAGGGTTTGCAGGATGGTGAGCC
dot-bracket secondary structure
.((((((..(((..((..(((((((((..((((((....(.....).....))))))..)))))))))..))..))).)).)))).
SIMILARITIES| miRBase mml-mir-188: 2e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-188: 2e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
