ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-208
source: miRBase, original name: cfa-mir-208b (MI0010366)
SEQUENCE & STRUCTURE| miRNA ATAAGACGAACAAAAGGTTTGT miRNA* AAGCTTTTTGCTCGCGTTATGT mismatches: 4 bulges: 0 |
pre-miRNA
CCTCTCAGGGAAGCTTTTTGCTCGCGTTATGTTTCTCATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGG
dot-bracket secondary structure
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CCTCTCAGGGAAGCTTTTTGCTCGCGTTATGTTTCTCATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGG
dot-bracket secondary structure
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))
SIMILARITIES| miRBase eca-mir-208b: 1e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-208: 3e-28 |
Identical with: rno-mir-208b from miRBase (MNEST032799) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
