ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-192
source: miRBase, original name: cfa-mir-215 (MI0010343)
SEQUENCE & STRUCTURE| miRNA ATGACCTACGAATTGATAGACA miRNA* TCTGTCATTTTTGTAGGCCAATA mismatches: 3 bulges: 1 |
pre-miRNA
TGTACAGGAAAATGACCTACGAATTGATAGACAATTTGGCTAAGTTTGTCTGTCATTTTTGTAGGCCAATATTCTGTAT
dot-bracket secondary structure
.((((((((.(.((.((((((((.((((((((((.((.....)).))))))))))..)))))))).)).).))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TGTACAGGAAAATGACCTACGAATTGATAGACAATTTGGCTAAGTTTGTCTGTCATTTTTGTAGGCCAATATTCTGTAT
dot-bracket secondary structure
.((((((((.(.((.((((((((.((((((((((.((.....)).))))))))))..)))))))).)).).))))))))
SIMILARITIES| miRBase eca-mir-215: 2e-26 PMRD no hits microPC no hits | UniProt no hits RFAM mir-192: 2e-38 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
