ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-216
source: miRBase, original name: cfa-mir-216a (MI0010344)
SEQUENCE & STRUCTURE| miRNA TAATCTCAGCTGGCAACTGTG miRNA* CAGTGGTCTCTGGGATTATG mismatches: 2 bulges: 1 |
pre-miRNA
GATGGCTGTGAGTTGGCTTAATCTCAGCTGGCAACTGTGAGATGTTCATACAATCCCCCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATATCCTT
GCCCT
dot-bracket secondary structure
(((((((.((..(((((.(((((((((..(((.((((((.(((((....)).)))...)))))).))).))))))))).))))).)).)))..))))...
.....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GATGGCTGTGAGTTGGCTTAATCTCAGCTGGCAACTGTGAGATGTTCATACAATCCCCCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATATCCTT
GCCCT
dot-bracket secondary structure
(((((((.((..(((((.(((((((((..(((.((((((.(((((....)).)))...)))))).))).))))))))).))))).)).)))..))))...
.....
SIMILARITIES| miRBase ssc-mir-216: 1e-52 PMRD no hits microPC no hits | UniProt no hits RFAM mir-216: 5e-37 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
