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ABOUT THIS RECORD
ID:
MNEST026778
species:
Canis familiaris
miRNA family:
mir-218
source:
miRBase, original name:
cfa-mir-218-1
(
MI0008079
)
SEQUENCE & STRUCTURE
miRNA
TTGTGCTTGATCTAACCATGT
miRNA*
ATGGTTCCGTCAAGCACCATG
mismatches:
4
bulges:
0
View larger
pre-miRNA
TTGTGCTTGATCTAACCATGT
GGTTGCCAGGTATGAGTAAAAC
ATGGTTCCGTCAAGCACCATG
dot-bracket secondary structure
..(((((((((..((((((((
..((((((....)).)))).))
))))))..)))))))))....
SIMILARITIES
miRBase
lca-mir-218
:
9e-31
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-218: 2e-22
Identical with:
lca-mir-218
from miRBase (
MNEST031409
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"