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ABOUT THIS RECORD
ID:
MNEST026779
species:
Canis familiaris
miRNA family:
mir-218
source:
miRBase, original name:
cfa-mir-218-2
(
MI0008097
)
SEQUENCE & STRUCTURE
miRNA
TTGTGCTTGATCTAACCATGT
miRNA*
ATGGTTCTGTCAAGCACCGCG
mismatches:
4
bulges:
0
View larger
pre-miRNA
TTGTGCTTGATCTAACCATGT
GGTGGAACGATGGAAACGGAAC
ATGGTTCTGTCAAGCACCGCG
dot-bracket secondary structure
..(((((((((..((((((((
..........((....))..))
))))))..)))))))))....
SIMILARITIES
miRBase
lla-mir-218-2
:
9e-31
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-218: 2e-29
Identical with:
ssc-mir-218b
from miRBase (
MNEST034044
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"