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ABOUT THIS RECORD
ID:
MNEST026782
species:
Canis familiaris
miRNA family:
mir-221
source:
miRBase, original name:
cfa-mir-221
(
MI0008183
)
SEQUENCE & STRUCTURE
miRNA
AGCTACATTGTCTGCTGGGTTT
miRNA*
ACCTGGCATACAATGTAGATTTCTGT
mismatches:
5
bulges:
4
View larger
pre-miRNA
ACCTGGCATACAATGTAGATTTCTGT
GTTTGTTGGGCAAC
AGCTACATTGTCTGCTGGGTTT
dot-bracket secondary structure
(((..(((.(((((((((....((((
(((.....))).))
))))))))))).)))..)))..
SIMILARITIES
miRBase
ssc-mir-221
:
1e-29
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-221: 1e-23
Identical with:
ssc-mir-221
from miRBase (
MNEST034046
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"