ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-221
source: miRBase, original name: cfa-mir-222 (MI0010346)
SEQUENCE & STRUCTURE| miRNA AGCTACATCTGGCTACTGGGT miRNA* TCAGTAGCCAGTGTAGATCC mismatches: 2 bulges: 1 |
pre-miRNA
CCCTCAATGGCTCAGTAGCCAGTGTAGATCCTGTCTTTTGTAATCAGTAGCTACATCTGGCTACTGGGTCTCTGATGGCATCTTCTAGCT
dot-bracket secondary structure
((.(((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).))............
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CCCTCAATGGCTCAGTAGCCAGTGTAGATCCTGTCTTTTGTAATCAGTAGCTACATCTGGCTACTGGGTCTCTGATGGCATCTTCTAGCT
dot-bracket secondary structure
((.(((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).))............
SIMILARITIES| miRBase bta-mir-222: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-221: 1e-28 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
