ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-223
source: miRBase, original name: cfa-mir-223 (MI0010347)
SEQUENCE & STRUCTURE| miRNA TGTCAGTTTGTCAAATACCCC miRNA* TGTATTTGACAAGCTGAGTTAGACACT mismatches: 2 bulges: 6 |
pre-miRNA
CCTGGCCTCCTGCAGTGCCACACTCCGTGTATTTGACAAGCTGAGTTAGACACTCCATGTGGAAGAGTGTCAGTTTGTCAAATACCCCAAGTGCGGCACA
TGC
dot-bracket secondary structure
...........((((((((.((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))).))))).
)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CCTGGCCTCCTGCAGTGCCACACTCCGTGTATTTGACAAGCTGAGTTAGACACTCCATGTGGAAGAGTGTCAGTTTGTCAAATACCCCAAGTGCGGCACA
TGC
dot-bracket secondary structure
...........((((((((.((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))).))))).
)))
SIMILARITIES| miRBase ggo-mir-223: 1e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-223: 2e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
