ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-423
source: miRBase, original name: cfa-mir-423a (MI0008166)
SEQUENCE & STRUCTURE| miRNA TGAGGGGCAGAGAGCGAGACTTT miRNA* AGCTCGGTCTGAGGCCCCTCAGT mismatches: 3 bulges: 2 |
pre-miRNA
TGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGT
dot-bracket secondary structure
((((((((..(((.((((.(((((.........))))))))).)))...))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
TGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGT
dot-bracket secondary structure
((((((((..(((.((((.(((((.........))))))))).)))...))))))))..
SIMILARITIES| miRBase eca-mir-423: 8e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-423: 1e-26 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
