ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-433
source: miRBase, original name: cfa-mir-433 (MI0008131)
SEQUENCE & STRUCTURE| miRNA ATCATGATGGGCTCCTCGGTGT miRNA* TACGGTGAGCCTGTCATTATTC mismatches: 6 bulges: 0 |
pre-miRNA
TACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGT
dot-bracket secondary structure
..(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
TACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGT
dot-bracket secondary structure
..(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))....
SIMILARITIES| miRBase mml-mir-433: 1e-36 PMRD no hits microPC no hits | UniProt sp|Q7M732|RTL1_MOUSE: 0.000006 RFAM mir-433: 2e-35 |
Identical with: hsa-mir-433 from miRBase (MNEST028652) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
