ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-448
source: miRBase, original name: cfa-mir-448 (MI0001640)
SEQUENCE & STRUCTURE| miRNA TTGCATATGTAGGATGTCCCAT miRNA* TGAACATCCTGCATAGTGCTGCC mismatches: 3 bulges: 1 |
pre-miRNA
GCAGGGAGGTTGAACATCCTGCATAGTGCTGCCAGGAAATCCCTATTTTATACTAAGGGGGCTGGCTGGTTGCATATGTAGGATGTCCCATCTCCCCGCC
CACTTCATCG
dot-bracket secondary structure
((.(((((((.(.((((((((((((.(((.(((((..(..((((............))))..)..))))).))))))))))))))).).))))))).)).
..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M, Nature. 434:338-345(2005)., "Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals"
GCAGGGAGGTTGAACATCCTGCATAGTGCTGCCAGGAAATCCCTATTTTATACTAAGGGGGCTGGCTGGTTGCATATGTAGGATGTCCCATCTCCCCGCC
CACTTCATCG
dot-bracket secondary structure
((.(((((((.(.((((((((((((.(((.(((((..(..((((............))))..)..))))).))))))))))))))).).))))))).)).
..........
SIMILARITIES| miRBase eca-mir-448: 1e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-448: 2e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M, Nature. 434:338-345(2005)., "Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals"
