ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-455
source: miRBase, original name: cfa-mir-455 (MI0007999)
SEQUENCE & STRUCTURE| miRNA TATGTGCCTTTGGACTACATCG miRNA* ATGCAGTCCATGGGCATATACA mismatches: 3 bulges: 0 |
pre-miRNA
ATATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACA
dot-bracket secondary structure
)(((((((((.((((((.(((.(((........))).))).)))))).)))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
ATATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACA
dot-bracket secondary structure
)(((((((((.((((((.(((.(((........))).))).)))))).)))))))))..
SIMILARITIES| miRBase mml-mir-455: 3.0E-27 PMRD no hits microPC no hits | UniProt no hits RFAM 5mir-455: 1.0E-23 |
Identical with: hsa-mir-455 from miRBase (MNEST028666), mml-mir-455 from miRBase , ssc-mir-455 from miRBase , bta-mir-455 from miRBase , ptr-mir-455 from miRBase , ppy-mir-455 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
