ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-488
source: miRBase, original name: cfa-mir-488 (MI0010402)
SEQUENCE & STRUCTURE| miRNA CCCAGATAATGGCACTCTCAA miRNA* GAAAGGCTATTTCTTGGTC mismatches: 2 bulges: 2 |
pre-miRNA
GAGAATCATCTCTCCCAGATAATGGCACTCTCAAACAAGTTTTCAAGTTGTTTGAAAGGCTATTTCTTGGTCAGAAGACTCTC
dot-bracket secondary structure
((((.((.(((..((.(((.((((((.((.((((((((.(.....).)))))))).))))))))))).))..))).)).))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GAGAATCATCTCTCCCAGATAATGGCACTCTCAAACAAGTTTTCAAGTTGTTTGAAAGGCTATTTCTTGGTCAGAAGACTCTC
dot-bracket secondary structure
((((.((.(((..((.(((.((((((.((.((((((((.(.....).)))))))).))))))))))).))..))).)).))))
SIMILARITIES| miRBase eca-mir-488: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-488: 3e-38 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
