ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-504
source: miRBase, original name: cfa-mir-504 (MI0010406)
SEQUENCE & STRUCTURE| miRNA AGACCCTGGTCTGCACTCTATC miRNA* AGGGAGCGCAGGGCAGGGTTTCC mismatches: 3 bulges: 1 |
pre-miRNA
GCTGCTGTTGGGAGACCCTGGTCTGCACTCTATCTGTATGCTTACTGAAGGGAGCGCAGGGCAGGGTTTCCCATACAGAGGGC
dot-bracket secondary structure
(((.((((((((((((((((.(((((.((((.((.(((....))).))..)))).))))).)))))))))))).))))..)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GCTGCTGTTGGGAGACCCTGGTCTGCACTCTATCTGTATGCTTACTGAAGGGAGCGCAGGGCAGGGTTTCCCATACAGAGGGC
dot-bracket secondary structure
(((.((((((((((((((((.(((((.((((.((.(((....))).))..)))).))))).)))))))))))).))))..)))
SIMILARITIES| miRBase eca-mir-504: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-504: 1e-31 |
Identical with: eca-mir-504 from miRBase (MNEST027216) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
