ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-505
source: miRBase, original name: cfa-mir-505 (MI0010407)
SEQUENCE & STRUCTURE| miRNA GGGAGCCAGGAAGTATTGATGT miRNA* GTCAACACTTGCTGGTTTCCTC mismatches: 2 bulges: 0 |
pre-miRNA
CAGTGGGGGAGCCAGGAAGTATTGATGTTTCTGCCAGTTTAGCGTCAACACTTGCTGGTTTCCTCTCTGGAGCATC
dot-bracket secondary structure
(((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CAGTGGGGGAGCCAGGAAGTATTGATGTTTCTGCCAGTTTAGCGTCAACACTTGCTGGTTTCCTCTCTGGAGCATC
dot-bracket secondary structure
(((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).))).......
SIMILARITIES| miRBase eca-mir-505: 8e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-505: 1e-36 |
Identical with: mml-mir-505 from miRBase (MNEST027947) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
