ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-551
source: miRBase, original name: cfa-mir-551b (MI0010412)
SEQUENCE & STRUCTURE| miRNA GCGACCCATACTTGGTTTCAG miRNA* GAAATCAAGTGTGGGTGAGA mismatches: 2 bulges: 1 |
pre-miRNA
GTGCTCTCCTGGCCCATGAAATCAAGTGTGGGTGAGACCTGGTGCACAGCGGGAAGGCGACCCATACTTGGTTTCAGAGGCTGCGAGAAT
dot-bracket secondary structure
....((((.(((((..((((((((((((((((((...((((.(....).))))....).)))))))))))))))))..))))).))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
GTGCTCTCCTGGCCCATGAAATCAAGTGTGGGTGAGACCTGGTGCACAGCGGGAAGGCGACCCATACTTGGTTTCAGAGGCTGCGAGAAT
dot-bracket secondary structure
....((((.(((((..((((((((((((((((((...((((.(....).))))....).)))))))))))))))))..))))).))))..
SIMILARITIES| miRBase ptr-mir-551b: 6e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-551: 3e-29 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
