ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-592
source: miRBase, original name: cfa-mir-592 (MI0010417)
SEQUENCE & STRUCTURE| miRNA ATTGTGTCAATATGCGATGATGT miRNA* CGTCATCACGTGGTGACGCAACAT mismatches: 3 bulges: 1 |
pre-miRNA
TGATATTATGCCATGACATTGTGTCAATATGCGATGATGTGTGTGATGGCACAGCGTCATCACGTGGTGACGCAACATCATGACGTAAGACATCA
dot-bracket secondary structure
.(((.(((((.(((((..((((((((.((((.((((((((((((....))))).))))))).)))).))))))))..))))).)))))...))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TGATATTATGCCATGACATTGTGTCAATATGCGATGATGTGTGTGATGGCACAGCGTCATCACGTGGTGACGCAACATCATGACGTAAGACATCA
dot-bracket secondary structure
.(((.(((((.(((((..((((((((.((((.((((((((((((....))))).))))))).)))).))))))))..))))).)))))...))).
SIMILARITIES| miRBase mmu-mir-592: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-592: 1e-31 |
Identical with: eca-mir-592 from miRBase (MNEST027240) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
