ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-652
source: miRBase, original name: cfa-mir-652 (MI0008167)
SEQUENCE & STRUCTURE| miRNA AATGGCGCCACTAGGGTTGTGC miRNA* ACAACCCTAGGAGAGGGTGCCATTCA mismatches: 3 bulges: 4 |
pre-miRNA
ACAACCCTAGGAGAGGGTGCCATTCACATAGACTATAATTGAATGGCGCCACTAGGGTTGTGC
dot-bracket secondary structure
((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
ACAACCCTAGGAGAGGGTGCCATTCACATAGACTATAATTGAATGGCGCCACTAGGGTTGTGC
dot-bracket secondary structure
((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))..
SIMILARITIES| miRBase eca-mir-652: 4e-30 PMRD no hits microPC no hits | UniProt no hits RFAM mir-652: 2e-26 |
Identical with: hsa-mir-652 from miRBase (MNEST028970) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
