ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-653
source: miRBase, original name: cfa-mir-653 (MI0010423)
SEQUENCE & STRUCTURE| miRNA GTGTTGAAACAATCTCTATTG miRNA* CTGGAGTTTGTTTCAATATTG mismatches: 2 bulges: 0 |
pre-miRNA
TCATTCCTTCAGTGTTGAAACAATCTCTATTGAACCAGGCTCCAAACCAAGTTCACTGGAGTTTGTTTCAATATTGCAAGAATGATAAGAT
dot-bracket secondary structure
((((((...((((((((((((((.(((((.(((((..((.......))..))))).))))).))))))))))))))...))))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TCATTCCTTCAGTGTTGAAACAATCTCTATTGAACCAGGCTCCAAACCAAGTTCACTGGAGTTTGTTTCAATATTGCAAGAATGATAAGAT
dot-bracket secondary structure
((((((...((((((((((((((.(((((.(((((..((.......))..))))).))))).))))))))))))))...))))))......
SIMILARITIES| miRBase eca-mir-653: 2e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-653: 4e-34 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
